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This happens because the Clone Stamp and Spot Healing Tools sample the available information of all layers below the repair layer at the time of their use. If you change any aspect of those layers below the repair layer, the cloned information will now be different.

As MrToM suggested, just add a new adjustment layer to the top of the layer stack. Any changes made will now affect all layers below it including the repair layer.

 I actually do this often but I just use a "Merge a copy of all visible layers into target layer" which is > select the uppermost layer, hit shift + Opt/Alt + Cmd/Cntrl + E. This creates a new merged layer of all the underlying layers without sacrificing them.